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Leaf IssuesSerious

Brown Spots on Cannabis Leaves

Brown spots on cannabis leaves can mean a nutrient deficiency, a fungal infection, or damage from water droplets and light. The pattern and location of the spots tells you which.

What it looks like

  • Small rust-colored, dark brown, or yellow-brown spots
  • Spots often on older (lower) leaves first
  • Spots may be surrounded by yellow halos
  • Progressive — they usually spread if untreated

Quick diagnostic checks

1If you use RO or distilled water, add Cal-Mag immediately
2Remove any spotted leaves below the canopy to limit fungal spread
3Check runoff pH — Ca and Mg both lock out at wrong pH

Measure before you treat

Plant diagnostic essentials

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These tools help confirm the cause of brown spots before you change nutrients, watering, or the environment.

Carson MicroBrite Pocket Microscope

Inspect leaf undersides for mites, eggs, mildew, and harvest-ready trichomes.

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Govee Bluetooth Hygrometer

Track temperature and humidity trends instead of guessing from one reading.

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VIVOSUN pH and TDS Meter Combo

Check root-zone pH and nutrient strength before changing a feeding plan.

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Causes ranked by likelihood

1. Calcium deficiency

Most common

Signs

  • Small brown/rust spots scattered across young-to-middle leaves
  • New growth may be twisted or distorted
  • Common in coco coir and RO/filtered water setups

Fix

  • Add Cal-Mag supplement at 3-5 ml/gal every feeding
  • Check pH — calcium absorbs best at 6.2-6.5 in soil
  • If using RO water, ALWAYS add Cal-Mag

Recommended products

Botanicare Cal-Mag Plus

The standard Cal-Mag — fixes most spotting

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2. Magnesium deficiency

Common

Signs

  • Yellowing BETWEEN the veins (interveinal chlorosis) turning brown
  • Starts on lower leaves and moves up
  • Leaf tips may curl upward

Fix

  • Foliar spray with 1 tsp Epsom salt per quart of water
  • Add Cal-Mag to feed
  • Check pH — Mg locks out below 6.0 in soil

3. Leaf septoria (fungal)

Common

Signs

  • Yellow spots that turn brown with distinct circular edges
  • Starts on lower leaves, spreads upward in humid conditions
  • Worst after rain or high humidity

Fix

  • Remove and destroy affected leaves (don't compost)
  • Improve airflow with oscillating fans
  • Drop humidity below 60% in veg, 50% in flower
  • Apply a copper-based fungicide if outdoors

4. Light burn from water droplets

Possible

Signs

  • Spots appear only on upper leaves under the light
  • Happened after a foliar spray

Fix

  • Only foliar spray with lights off
  • Spray in early evening so leaves dry overnight

⚠️When to worry

Spots that spread across more than 20% of the canopy in a week, or that appear on buds directly, need immediate action. Bud-level spots during flower can lead to bud rot.

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